BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B03LP1|AL425327
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1412 467 e-131
>3x_Contig1412
Length = 7639
Score = 467 bits (229), Expect = e-131
Identities = 304/323 (94%), Gaps = 9/323 (2%)
Strand = Plus / Plus
Query: 471 ttcacaacyactarwcaagatctcactcgcaaaytgkgttatgtacttyttgaaaatgtg 530
|||||||| |||| ||| |||||||| ||||| || |||| |||||| ||||||||| |
Sbjct: 6573 ttcacaactactagtcaa-atctcact-gcaaattg-gtta-gtactt-ttgaaaatg-g 6626
Query: 531 kkcaaatccaccatagataaaggtttaaaagcctgttwtgttctttaaattaacttctaa 590
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6627 ttcaaatccaccat-gataaaggtttaaaagcctgtt-tgttctttaaattaacttctaa 6684
Query: 591 atctatccatttttcgatttgccgyccaaaaaacagtaccggggacaaattgccaccgtc 650
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6685 atctatccatttttcgatttgccgttcaaaaaacagtaccggggacaaattgccaccgtc 6744
Query: 651 aatagtgattaggatttcgaatctatacgtgcatagtgattaatggtttgtgaatcaaga 710
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6745 aatagtgattaggattt-gaatctatacgtgcatagtgattaatggtttgtgaatcaaga 6803
Query: 711 cacgaagccttacgcgtaaatkatattttactacatagacaacaaaactatgttacattt 770
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6804 cacgaagccttacgcgtaaatgatattttactacatagacaacaaaactatgttacattt 6863
Query: 771 acratctaaataatcctccgcta 793
|| ||||||||||||||||||||
Sbjct: 6864 acaatctaaataatcctccgcta 6886
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.717 1.34
Gapped
Lambda K H
1.41 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4049
Number of Sequences: 1807
Number of extensions: 4049
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.4 bits)